Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8278

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8277: 16645 - Hypothetical Protein, at 824512 to 825100 16645 mRNA_8278: 16646 - K16330 K16330 pseudouridylate synthase / pseudouridine kinase, at 825362 to 828181 16646 mRNA_8279: 16647 - BLAST Type-1 angiotensin II receptor-associated protein [Ch..., at 829000 to 829923 16647

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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824,563 - -2.1
824,719 - 16645 mRNA_8277 0.35 1.4
824,741 - 16645 mRNA_8277 0.39 -2.7
824,883 + 16645 mRNA_8277 0.63 -0.7
825,269 - 1.8
825,281 - 1.4
825,609 + 0.2
826,311 - 16646 mRNA_8278 0.34 -0.8
826,338 + 16646 mRNA_8278 0.35 0.4
826,471 - 16646 mRNA_8278 0.39 0.3
827,224 - 16646 mRNA_8278 0.66 0.5
827,326 - 16646 mRNA_8278 0.70 -0.8
827,374 - 16646 mRNA_8278 0.71 -0.2
827,386 + 16646 mRNA_8278 0.72 0.6
827,513 - 16646 mRNA_8278 0.76 -0.2
827,528 + 16646 mRNA_8278 0.77 0.1
827,655 + 16646 mRNA_8278 0.81 -0.7
828,247 - 0.9
828,405 + -1.1
828,668 + -0.1
828,801 - 0.0
828,812 + 0.5
828,820 - -1.9
828,839 + 0.2
828,843 + 1.3
828,845 + -0.7
828,848 - 0.1
828,983 - -0.8
828,984 + 0.7
828,986 - 0.2
828,994 - 1.8
828,999 + -0.6
829,001 + -1.3
829,005 - 1.5