Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8267

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804995 to 806356 16634 mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806792 to 809289 16635 mRNA_8268: 16636 - K11511 APITD1, CENPS, MHF1 centromere protein S, at 809649 to 810847 16636

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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805,938 + 16634 mRNA_8266 0.69 -1.6
806,226 - -0.7
806,271 + -0.3
806,382 - -0.1
806,390 - -1.2
806,508 - -0.7
806,526 + -1.2
806,526 - 0.1
806,528 - 0.2
806,530 - -0.1
806,530 - -0.5
806,539 - 1.6
806,550 - -0.5
806,554 - 0.7
806,557 + -1.2
806,560 + 1.7
806,589 - 0.2
806,639 - 0.3
806,640 + 2.0
806,648 - 0.5
806,691 - 0.1
806,718 + -0.6
806,730 + 0.3
806,969 - 0.8
806,970 + -0.0
806,999 - -2.2
807,168 - 16635 mRNA_8267 0.15 0.8
807,422 - 16635 mRNA_8267 0.25 -0.0
808,313 + 16635 mRNA_8267 0.61 -0.6
809,285 - 0.3
809,286 - 0.9
809,290 - -0.3
809,302 - 1.5
809,342 + -0.0
809,427 - -1.1
809,430 - -0.4
809,474 + 0.8
809,476 - 2.7
810,061 - 16636 mRNA_8268 0.34 0.2
810,200 - 16636 mRNA_8268 0.46 -0.4
810,215 - 16636 mRNA_8268 0.47 0.5