Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8250

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8249: 16617 - SUPERFAMILY--SSF52047, at 762768 to 764331 16617 mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764459 to 766227 16618 mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766880 to 770400 16619

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
763,758 - 16617 mRNA_8249 0.63 0.2
763,774 + 16617 mRNA_8249 0.64 0.7
764,149 - 16617 mRNA_8249 0.88 -0.8
764,311 - 0.3
764,316 + -0.3
764,324 + -0.2
764,475 - 1.1
764,605 - 1.3
764,708 - 16618 mRNA_8250 0.14 -0.7
764,711 - 16618 mRNA_8250 0.14 -0.6
764,880 - 16618 mRNA_8250 0.24 -1.3
764,894 + 16618 mRNA_8250 0.25 0.1
764,911 + 16618 mRNA_8250 0.26 0.0
764,915 - 16618 mRNA_8250 0.26 0.1
765,338 + 16618 mRNA_8250 0.50 2.3
765,500 + 16618 mRNA_8250 0.59 0.9
765,761 - 16618 mRNA_8250 0.74 0.9
765,908 + 16618 mRNA_8250 0.82 0.6
766,023 + 16618 mRNA_8250 0.88 0.2
766,059 + -0.8
766,071 - 0.8
766,201 - 1.3
766,214 + -0.6
766,284 - -0.7
766,331 - 0.5
766,340 - 1.3
766,358 - -0.4
766,505 + -0.7
766,651 - 1.2
766,655 + -1.1
766,667 + 0.2
766,958 - -2.1