Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8151

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530579 to 532165 16518 mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532598 to 536503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536656 to 537504 16520

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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532,258 - 0.6
532,388 - 0.2
532,392 - 1.3
532,393 + -1.0
532,399 + 1.9
532,407 + -1.3
532,493 - -0.8
532,532 + -1.4
532,536 + 2.5
532,538 - 1.8
532,538 + -0.9
532,543 + 0.9
532,544 - 0.8
532,592 - -2.0
532,680 + 0.2
532,682 - 0.7
532,687 - 1.9
532,696 + -0.7
532,696 + -0.1
532,825 + -0.7
532,836 + 0.4
532,844 - 0.1
532,853 + -0.5
533,110 - 16519 mRNA_8151 0.13 0.7
533,181 - 16519 mRNA_8151 0.15 1.4
533,271 + 16519 mRNA_8151 0.17 0.4
533,392 - 16519 mRNA_8151 0.20 0.4
533,404 + 16519 mRNA_8151 0.21 2.1
533,572 - 16519 mRNA_8151 0.25 -0.5
533,580 + 16519 mRNA_8151 0.25 -1.1
534,100 + 16519 mRNA_8151 0.38 0.3
534,143 + 16519 mRNA_8151 0.40 0.3
534,479 - 16519 mRNA_8151 0.48 0.6
534,542 + 16519 mRNA_8151 0.50 -0.4
534,558 - 16519 mRNA_8151 0.50 -1.2
534,580 + 16519 mRNA_8151 0.51 0.3
534,631 - 16519 mRNA_8151 0.52 1.0
535,322 - 16519 mRNA_8151 0.70 0.4
535,452 - 16519 mRNA_8151 0.73 -1.6
535,731 + 16519 mRNA_8151 0.80 -1.7
535,892 - 16519 mRNA_8151 0.84 0.2
535,999 - 16519 mRNA_8151 0.87 -0.6
536,164 + -2.1
536,750 + 16520 mRNA_8152 0.11 0.6
537,125 - 16520 mRNA_8152 0.55 -0.2
537,241 - 16520 mRNA_8152 0.69 -0.2
537,333 - 16520 mRNA_8152 0.80 1.2
537,361 - 16520 mRNA_8152 0.83 1.3
537,465 - -0.1
537,470 - -0.7