Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8143

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513309 to 514169 16510 mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514530 to 515609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515756 to 518130 16512

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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513,541 + 16510 mRNA_8142 0.27 -0.7
513,967 + 16510 mRNA_8142 0.76 0.3
514,121 + 0.7
514,145 + 0.5
514,349 - 0.1
514,381 - -1.0
515,428 + 16511 mRNA_8143 0.83 0.3
515,524 + 0.0
515,565 + 0.4
515,682 - 2.7
515,750 - -0.6
515,847 - 1.7
515,848 - -0.2
515,985 - 0.3
516,007 + 16512 mRNA_8144 0.11 -0.2
516,109 + 16512 mRNA_8144 0.15 0.3
516,141 + 16512 mRNA_8144 0.16 1.4
516,150 + 16512 mRNA_8144 0.17 2.6
516,300 - 16512 mRNA_8144 0.23 -1.7
516,302 + 16512 mRNA_8144 0.23 -1.4
516,336 + 16512 mRNA_8144 0.24 -0.9