Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8076

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8076: 16444 - Hypothetical Protein, at 368382 to 369179 16444 mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369539 to 370935 16445

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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367,454 - 0.7
367,462 + -0.6
367,464 - -0.9
367,476 + 0.9
367,489 + 0.6
367,494 - -0.1
367,593 + 3.7
367,599 + -1.1
367,604 - 0.8
367,614 - -1.0
367,621 + 0.5
367,635 + 1.8
367,766 + 1.1
367,768 - -0.3
367,769 + 0.1
367,796 + 1.5
367,810 + 0.5
367,816 + -0.8
367,892 + 1.6
367,893 + 0.5
367,896 - -0.1
367,901 + -1.1
367,920 - -0.8
367,920 + -0.6
367,920 - 2.4
367,923 + -0.4
367,933 - 1.2
367,941 - -0.9
367,953 + 0.4
367,956 + -1.7
367,958 - 0.7
367,972 + 0.8
367,975 - -1.9
367,985 + -0.9
367,989 + 0.1
368,011 + 2.5
368,013 + 0.7
368,014 - -0.1
368,017 - -0.4
368,018 - 0.0
368,021 - -0.2
368,026 - -0.4
368,032 + -0.1
368,040 - 0.9
368,046 + -0.9
368,056 - -0.4
368,057 - -1.0
368,060 + -1.1
368,061 - 1.7
368,064 - 0.5
368,067 - 0.4
368,097 - -0.0
368,111 + 0.2
368,111 + 1.8
368,133 - 2.1
368,135 - -0.6
368,152 - 1.6
368,155 - 0.1
368,156 + 0.1
368,162 - 0.1
368,177 - 0.8
368,184 - 0.6
368,185 - -0.1
368,189 - -0.9
368,195 - -0.4
368,200 - 0.1
368,200 + -0.3
368,209 - 0.1
368,210 + 2.6
368,217 - 0.4
368,217 + -0.6
368,220 - -0.8
368,222 - -0.2
368,236 + 0.6
368,236 - -0.8
368,252 + -0.1
368,255 + 0.5
368,275 - -1.0
368,279 - 1.0
368,280 + 0.9
368,284 + -0.6
368,293 - 0.0
368,324 + 0.3
368,340 - -1.2
368,345 + 1.4
368,345 + -0.7
368,349 - 0.0
368,357 - 0.3
368,361 - -0.2
368,370 + -0.3
368,381 - -1.4
368,397 - 1.8
368,403 - 1.6
368,404 - 1.2
368,416 - 0.8
368,430 - 1.0
368,433 + -0.4
368,436 - 0.3
368,450 - -0.6
368,461 + -1.9
368,473 - 16444 mRNA_8076 0.11 -0.3
368,485 - 16444 mRNA_8076 0.13 0.3
368,495 - 16444 mRNA_8076 0.14 0.6
368,500 + 16444 mRNA_8076 0.15 1.8
368,506 + 16444 mRNA_8076 0.16 -0.3
368,515 + 16444 mRNA_8076 0.17 0.2
368,528 - 16444 mRNA_8076 0.18 0.1
368,531 - 16444 mRNA_8076 0.19 1.7
368,553 + 16444 mRNA_8076 0.21 0.6
368,564 + 16444 mRNA_8076 0.23 -0.3
368,574 - 16444 mRNA_8076 0.24 1.1
368,581 + 16444 mRNA_8076 0.25 -0.0
368,584 + 16444 mRNA_8076 0.25 -0.6
368,585 - 16444 mRNA_8076 0.25 -0.1
368,595 - 16444 mRNA_8076 0.27 0.8
368,596 + 16444 mRNA_8076 0.27 0.5
368,602 - 16444 mRNA_8076 0.28 0.1
368,606 - 16444 mRNA_8076 0.28 -1.9
368,607 + 16444 mRNA_8076 0.28 0.1
368,608 + 16444 mRNA_8076 0.28 -0.4
368,610 - 16444 mRNA_8076 0.29 0.7
368,611 + 16444 mRNA_8076 0.29 -0.7
368,611 + 16444 mRNA_8076 0.29 1.1
368,623 + 16444 mRNA_8076 0.30 1.1
368,624 - 16444 mRNA_8076 0.30 -1.2
368,641 + 16444 mRNA_8076 0.32 -0.0
368,642 - 16444 mRNA_8076 0.33 -0.1
368,642 - 16444 mRNA_8076 0.33 -0.3
368,664 - 16444 mRNA_8076 0.35 0.6
368,668 + 16444 mRNA_8076 0.36 1.4
368,678 - 16444 mRNA_8076 0.37 -0.2
368,693 - 16444 mRNA_8076 0.39 0.9
368,693 + 16444 mRNA_8076 0.39 1.0
368,696 + 16444 mRNA_8076 0.39 -0.7
368,718 + 16444 mRNA_8076 0.42 -0.2
368,724 - 16444 mRNA_8076 0.43 -0.5
368,727 + 16444 mRNA_8076 0.43 -0.5
368,738 - 16444 mRNA_8076 0.45 -0.4
368,743 + 16444 mRNA_8076 0.45 0.7
368,744 - 16444 mRNA_8076 0.45 -0.5
368,745 + 16444 mRNA_8076 0.45 -1.4
368,747 - 16444 mRNA_8076 0.46 -1.7
368,747 - 16444 mRNA_8076 0.46 -1.0
368,763 - 16444 mRNA_8076 0.48 0.8
368,765 + 16444 mRNA_8076 0.48 -1.2
368,766 + 16444 mRNA_8076 0.48 -0.1
368,769 - 16444 mRNA_8076 0.48 0.1
368,770 - 16444 mRNA_8076 0.49 2.2
368,774 - 16444 mRNA_8076 0.49 -1.0
368,775 + 16444 mRNA_8076 0.49 -0.3
368,775 + 16444 mRNA_8076 0.49 0.3
368,775 + 16444 mRNA_8076 0.49 -0.5
368,776 - 16444 mRNA_8076 0.49 0.2
368,779 - 16444 mRNA_8076 0.50 0.5
368,786 + 16444 mRNA_8076 0.51 -0.3
368,788 + 16444 mRNA_8076 0.51 -0.8
368,796 + 16444 mRNA_8076 0.52 -0.1
368,796 + 16444 mRNA_8076 0.52 1.4
368,817 - 16444 mRNA_8076 0.55 -1.2
368,881 + 16444 mRNA_8076 0.63 0.0
368,912 + 16444 mRNA_8076 0.66 2.9
368,918 + 16444 mRNA_8076 0.67 1.1
368,928 + 16444 mRNA_8076 0.68 0.7
368,932 + 16444 mRNA_8076 0.69 0.2
368,932 + 16444 mRNA_8076 0.69 -0.6
368,936 - 16444 mRNA_8076 0.69 -0.3
368,938 - 16444 mRNA_8076 0.70 0.3
368,940 - 16444 mRNA_8076 0.70 1.4
368,940 - 16444 mRNA_8076 0.70 0.0
368,943 - 16444 mRNA_8076 0.70 -0.3
368,943 - 16444 mRNA_8076 0.70 1.0
368,949 - 16444 mRNA_8076 0.71 -1.1
368,949 - 16444 mRNA_8076 0.71 0.9
368,950 + 16444 mRNA_8076 0.71 -0.1
368,955 + 16444 mRNA_8076 0.72 -0.2
368,956 - 16444 mRNA_8076 0.72 -0.1
368,956 + 16444 mRNA_8076 0.72 0.0
368,956 + 16444 mRNA_8076 0.72 0.4
368,958 - 16444 mRNA_8076 0.72 -0.3
368,958 + 16444 mRNA_8076 0.72 -0.2
368,959 + 16444 mRNA_8076 0.72 0.0
368,961 - 16444 mRNA_8076 0.73 -0.6
368,969 - 16444 mRNA_8076 0.74 -0.2
368,974 + 16444 mRNA_8076 0.74 0.8
368,979 - 16444 mRNA_8076 0.75 -0.3
368,982 + 16444 mRNA_8076 0.75 -0.8
368,984 + 16444 mRNA_8076 0.75 -0.5
368,988 - 16444 mRNA_8076 0.76 2.9
368,988 + 16444 mRNA_8076 0.76 0.2
368,989 - 16444 mRNA_8076 0.76 0.2
369,001 + 16444 mRNA_8076 0.78 1.8
369,045 - 16444 mRNA_8076 0.83 2.0
369,049 + 16444 mRNA_8076 0.84 -0.4
369,058 - 16444 mRNA_8076 0.85 1.9
369,059 - 16444 mRNA_8076 0.85 0.3
369,073 + 16444 mRNA_8076 0.87 0.9
369,075 - 16444 mRNA_8076 0.87 1.1
369,080 + 16444 mRNA_8076 0.87 1.0
369,084 + 16444 mRNA_8076 0.88 0.7
369,110 + 1.3
369,170 - -0.7
369,203 - 0.2
369,207 - 0.1
369,211 + -0.1
369,213 - 1.2
369,242 + 1.4
369,259 + -0.1
369,272 - 1.2
369,286 + 0.3
369,323 + -1.0
369,330 - 1.7
369,331 + 0.1
369,337 - -0.6
369,339 - -2.2
369,343 + 1.1
369,343 - 0.1
369,345 + 1.2
369,348 + 1.6
369,349 + -0.1
369,354 + 2.0
369,354 - 0.5
369,355 - 1.0
369,355 + -0.0
369,359 - -0.5
369,361 + -0.2
369,366 + 0.3
369,366 + 0.7
369,366 + 0.7
369,370 + 2.2
369,370 + -0.5
369,371 - -0.1
369,372 - -0.6
369,372 - 0.4
369,372 + 0.8
369,373 - -1.3
369,373 - -0.2
369,375 - -0.6
369,375 + -0.1
369,376 + 0.9
369,382 + 2.1
369,394 - 0.7
369,407 - 0.9
369,511 + 1.2
369,514 - -0.3
369,514 - -1.4
369,518 - 0.5
369,529 - 1.3
369,534 - -0.0
369,536 - 1.7
369,540 + 2.5
369,547 - 0.3
369,549 + -1.5
369,560 - 2.6
369,561 - 1.9
369,618 - 0.0
369,639 + 0.5
369,684 - 16445 mRNA_8077 0.10 0.3
369,689 - 16445 mRNA_8077 0.11 1.1
369,695 + 16445 mRNA_8077 0.11 1.1
369,709 + 16445 mRNA_8077 0.12 -0.7
369,711 + 16445 mRNA_8077 0.12 1.8
369,718 - 16445 mRNA_8077 0.13 1.0
369,731 - 16445 mRNA_8077 0.14 -0.0
369,740 + 16445 mRNA_8077 0.14 -0.2
369,744 - 16445 mRNA_8077 0.15 3.7
369,745 + 16445 mRNA_8077 0.15 0.7
369,756 + 16445 mRNA_8077 0.16 2.8
369,760 + 16445 mRNA_8077 0.16 0.0
369,768 + 16445 mRNA_8077 0.16 -1.2
369,771 + 16445 mRNA_8077 0.17 0.5
369,778 - 16445 mRNA_8077 0.17 -0.2
369,780 + 16445 mRNA_8077 0.17 1.1
369,792 + 16445 mRNA_8077 0.18 0.9
369,805 - 16445 mRNA_8077 0.19 0.1
369,822 - 16445 mRNA_8077 0.20 1.6
369,827 - 16445 mRNA_8077 0.21 0.1
369,850 + 16445 mRNA_8077 0.22 0.3
369,850 + 16445 mRNA_8077 0.22 1.8
369,852 + 16445 mRNA_8077 0.22 0.6
369,862 + 16445 mRNA_8077 0.23 1.0
369,863 - 16445 mRNA_8077 0.23 2.1
369,863 - 16445 mRNA_8077 0.23 0.6
369,863 - 16445 mRNA_8077 0.23 0.3
369,863 - 16445 mRNA_8077 0.23 0.1
369,864 + 16445 mRNA_8077 0.23 0.4
369,866 + 16445 mRNA_8077 0.23 0.3
369,868 - 16445 mRNA_8077 0.24 0.9
369,891 - 16445 mRNA_8077 0.25 -0.9
369,919 + 16445 mRNA_8077 0.27 -0.2
369,929 - 16445 mRNA_8077 0.28 0.8
369,956 + 16445 mRNA_8077 0.30 -1.2
369,966 + 16445 mRNA_8077 0.31 1.4
369,979 - 16445 mRNA_8077 0.31 2.0
369,990 - 16445 mRNA_8077 0.32 1.2
369,996 + 16445 mRNA_8077 0.33 2.5
370,020 + 16445 mRNA_8077 0.34 0.1
370,030 - 16445 mRNA_8077 0.35 0.6
370,032 - 16445 mRNA_8077 0.35 -0.3
370,047 - 16445 mRNA_8077 0.36 0.2
370,048 + 16445 mRNA_8077 0.36 0.6
370,055 - 16445 mRNA_8077 0.37 0.3
370,056 - 16445 mRNA_8077 0.37 0.0
370,057 + 16445 mRNA_8077 0.37 0.7
370,071 - 16445 mRNA_8077 0.38 1.2
370,073 - 16445 mRNA_8077 0.38 0.3
370,091 - 16445 mRNA_8077 0.40 0.2
370,094 + 16445 mRNA_8077 0.40 0.2
370,096 - 16445 mRNA_8077 0.40 0.1
370,101 + 16445 mRNA_8077 0.40 -0.4
370,102 - 16445 mRNA_8077 0.40 0.9
370,109 - 16445 mRNA_8077 0.41 1.0
370,110 + 16445 mRNA_8077 0.41 0.3
370,118 + 16445 mRNA_8077 0.41 0.6
370,138 + 16445 mRNA_8077 0.43 1.9
370,141 + 16445 mRNA_8077 0.43 0.2
370,146 - 16445 mRNA_8077 0.43 -0.5
370,156 - 16445 mRNA_8077 0.44 -2.2
370,163 - 16445 mRNA_8077 0.45 0.5