Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8002

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8001: 16369 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 183994 to 185593 16369 mRNA_8002: 16370 - KOG0132 RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains, at 186103 to 188392 16370

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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185,395 + 16369 mRNA_8001 0.88 -0.5
185,425 - 16369 mRNA_8001 0.89 -0.7
185,544 + -0.7
185,640 - 0.1
185,687 + 0.1
185,689 - 1.4
185,696 + -0.3
185,754 + 1.5
185,775 - -0.4
185,786 + -1.3
185,845 - -0.1
185,881 - -0.4
185,918 + -1.4
185,926 + -0.1
185,933 + -0.1
185,941 + 3.3
185,953 + 1.5
186,134 - -0.7
186,181 + -0.8
186,284 - -0.1
186,332 - 16370 mRNA_8002 0.10 0.4
186,396 - 16370 mRNA_8002 0.13 0.7
186,423 + 16370 mRNA_8002 0.14 -0.4
187,162 + 16370 mRNA_8002 0.46 0.3
187,294 - 16370 mRNA_8002 0.52 -0.8
187,449 + 16370 mRNA_8002 0.59 -0.3
187,454 - 16370 mRNA_8002 0.59 -1.6
187,467 - 16370 mRNA_8002 0.60 0.9
189,362 + -0.4