Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7971

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338 mRNA_7971: 16339 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 116954 to 120210 16339 mRNA_7972: 16340 - Hypothetical Protein, at 120428 to 122131 16340

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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115,966 - 16338 mRNA_7970 0.39 0.2
116,048 + 16338 mRNA_7970 0.47 1.6
116,051 - 16338 mRNA_7970 0.47 1.0
116,114 + 16338 mRNA_7970 0.52 0.6
116,117 + 16338 mRNA_7970 0.53 0.0
116,135 - 16338 mRNA_7970 0.54 0.1
116,170 + 16338 mRNA_7970 0.57 -0.2
116,185 - 16338 mRNA_7970 0.58 -1.8
116,267 + 16338 mRNA_7970 0.66 0.6
116,290 - 16338 mRNA_7970 0.68 0.8
116,404 + 16338 mRNA_7970 0.78 0.7
116,430 - 16338 mRNA_7970 0.80 0.8
116,431 + 16338 mRNA_7970 0.80 0.1
116,437 - 16338 mRNA_7970 0.80 1.8
116,440 - 16338 mRNA_7970 0.81 -0.3
116,488 + 16338 mRNA_7970 0.85 0.7
116,586 - -0.3
116,594 - 0.3
116,736 + 0.8
116,793 + 1.9
116,797 - 2.6
117,105 + 0.5
117,159 + -2.2
117,226 - -0.9
117,229 - -0.7
117,247 - 0.2
117,798 - 16339 mRNA_7971 0.26 -0.6
117,918 - 16339 mRNA_7971 0.30 -0.2
117,921 + 16339 mRNA_7971 0.30 -0.8
117,936 - 16339 mRNA_7971 0.30 0.7
117,963 - 16339 mRNA_7971 0.31 0.3
117,964 - 16339 mRNA_7971 0.31 -1.0
117,967 + 16339 mRNA_7971 0.31 0.5
117,985 - 16339 mRNA_7971 0.32 -0.5
118,110 + 16339 mRNA_7971 0.35 0.7
118,604 - 16339 mRNA_7971 0.51 1.3
118,682 + 16339 mRNA_7971 0.53 0.1
118,699 - 16339 mRNA_7971 0.54 1.0
118,707 + 16339 mRNA_7971 0.54 -0.5
118,772 + 16339 mRNA_7971 0.56 -0.9
118,849 + 16339 mRNA_7971 0.58 -0.2
118,888 + 16339 mRNA_7971 0.59 0.0
118,956 + 16339 mRNA_7971 0.61 1.1
118,972 - 16339 mRNA_7971 0.62 0.8
119,169 - 16339 mRNA_7971 0.68 0.5
119,439 - 16339 mRNA_7971 0.76 2.3
119,513 + 16339 mRNA_7971 0.79 0.6
119,560 + 16339 mRNA_7971 0.80 0.6
120,006 + 0.1
120,013 - -0.1
120,198 + 1.8
120,235 - 1.9
120,397 + 2.7
120,420 - -0.4
120,436 + -1.3
120,450 - -1.0
120,564 + 2.7
120,629 + 16340 mRNA_7972 0.12 -0.1
120,648 + 16340 mRNA_7972 0.13 0.6
120,697 + 16340 mRNA_7972 0.16 -0.7
120,975 - 16340 mRNA_7972 0.32 2.8
120,977 - 16340 mRNA_7972 0.32 2.6
121,000 - 16340 mRNA_7972 0.34 0.2
121,081 + 16340 mRNA_7972 0.38 0.6
121,081 + 16340 mRNA_7972 0.38 1.8
121,183 + 16340 mRNA_7972 0.44 0.5