Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7947

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71933 to 72812 16314 mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73248 to 74114 16315 mRNA_7948: 16316 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 74444 to 75195 16316

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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72,297 + 16314 mRNA_7946 0.41 1.9
72,304 + 16314 mRNA_7946 0.42 -0.2
72,322 + 16314 mRNA_7946 0.44 2.2
72,414 - 16314 mRNA_7946 0.55 1.3
72,415 + 16314 mRNA_7946 0.55 2.0
72,433 + 16314 mRNA_7946 0.57 -1.4
72,450 + 16314 mRNA_7946 0.59 -1.1
72,471 - 16314 mRNA_7946 0.61 -1.4
72,506 - 16314 mRNA_7946 0.65 1.3
72,571 + 16314 mRNA_7946 0.72 -1.3
72,573 - 16314 mRNA_7946 0.73 -0.2
72,579 - 16314 mRNA_7946 0.73 0.4
72,580 + 16314 mRNA_7946 0.74 1.5
72,740 - 1.9
72,815 + -0.7
72,859 + -0.5
72,903 - 1.7
72,907 - -0.2
73,058 + 1.0
73,063 - 0.5
73,074 + -0.7
73,187 - -0.2
73,222 + -0.5
73,236 + -0.2
73,339 + 16315 mRNA_7947 0.10 -0.7
73,340 - 16315 mRNA_7947 0.11 -0.0
73,357 - 16315 mRNA_7947 0.13 0.1
73,529 - 16315 mRNA_7947 0.32 -1.4
73,530 + 16315 mRNA_7947 0.33 -0.5
73,537 + 16315 mRNA_7947 0.33 2.8
73,779 - 16315 mRNA_7947 0.61 -0.5
73,805 + 16315 mRNA_7947 0.64 0.4
74,097 - 0.7
74,108 + -0.2
74,119 + 0.2
74,345 - -0.2
74,350 + -0.4
74,359 - 0.7
74,363 - 0.2
74,366 + 0.7
74,380 + 0.4
74,500 - -0.7
74,504 + 0.5
74,570 - 16316 mRNA_7948 0.17 1.3
74,594 - 16316 mRNA_7948 0.20 0.3
74,934 + 16316 mRNA_7948 0.65 -0.8