Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7930

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7929: 16297 - K02013 ABC.FEV.A iron complex transport system ATP-binding protein, at 40683 to 43204 16297 mRNA_7930: 16298 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 43652 to 44554 16298

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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42,704 + 16297 mRNA_7929 0.80 0.6
42,819 - 16297 mRNA_7929 0.85 1.0
42,827 - 16297 mRNA_7929 0.85 0.4
42,849 + 16297 mRNA_7929 0.86 -0.3
42,849 + 16297 mRNA_7929 0.86 1.3
42,863 + 16297 mRNA_7929 0.86 -1.1
43,150 + -0.2
43,229 - -0.7
43,286 + 0.2
43,306 - -1.9
43,447 - 0.5
43,568 - -0.4
43,588 + 0.3
43,588 + -0.4
43,589 - -0.9
43,744 + 16298 mRNA_7930 0.10 -0.7
43,812 - 16298 mRNA_7930 0.18 0.2
43,823 + 16298 mRNA_7930 0.19 0.4
44,011 + 16298 mRNA_7930 0.40 0.3
44,018 + 16298 mRNA_7930 0.41 0.3
44,022 - 16298 mRNA_7930 0.41 -0.7
44,038 + 16298 mRNA_7930 0.43 -0.8
44,116 + 16298 mRNA_7930 0.51 -0.0
44,171 - 16298 mRNA_7930 0.57 -1.5
44,181 + 16298 mRNA_7930 0.59 1.2
44,187 - 16298 mRNA_7930 0.59 -1.2
44,311 + 16298 mRNA_7930 0.73 0.5
44,580 + 1.0
44,589 + 1.3
44,615 - 0.1
44,618 + 3.5
44,667 - -1.0
44,738 + -1.0
44,740 - -0.3
44,788 + -0.1
45,144 + 0.1
45,189 - 0.7
45,212 + 0.6
45,379 + -0.4
45,389 - -0.2
45,477 + -1.1
45,479 + 0.4