Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7921

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7920: 16288 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 24120 to 24922 16288 mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25144 to 26524 16289 mRNA_7922: 16290 - K17065 DNM1L dynamin 1-like protein, at 27039 to 30180 16290

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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24,299 - 16288 mRNA_7920 0.22 1.4
24,319 + 16288 mRNA_7920 0.25 1.8
24,323 - 16288 mRNA_7920 0.25 -0.3
24,434 + 16288 mRNA_7920 0.39 0.4
24,640 + 16288 mRNA_7920 0.65 -0.7
24,923 + -1.0
24,998 - 2.4
25,057 + 0.5
25,077 + 1.7
26,278 + 16289 mRNA_7921 0.82 1.3
26,518 - -0.4
26,523 + 1.6
26,527 + 0.8
26,531 - 1.4
26,558 - -0.3
26,650 - 0.8
26,674 - 0.1
26,676 - 3.0
26,681 - 0.4
26,683 + 1.2
26,696 + 3.3
26,697 - 0.3
26,702 + 0.4
26,713 + -1.3
26,840 - -0.4
26,842 - 2.0
26,844 - 1.8
26,847 + -1.0
26,849 - 0.2
26,851 + 0.4
26,852 - 2.1
26,856 + 1.0
26,873 - -0.4
26,896 + 0.1
26,902 + 0.2
27,132 - 1.1