Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7891

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7890: 16258 - K19564 CTR, HNM1 choline transport protein, at 1308906 to 1311166 16258 mRNA_7891: 16259 - Hypothetical Protein, at 1311426 to 1311848 16259 mRNA_7892: 16260 - K08496 GOSR2, BOS1 golgi SNAP receptor complex member 2, at 1312229 to 1313208 16260

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,310,434 - 16258 mRNA_7890 0.68 0.9
1,310,563 + 16258 mRNA_7890 0.73 1.0
1,310,593 + 16258 mRNA_7890 0.75 0.1
1,310,977 + -1.6
1,311,035 + -0.0
1,311,287 - 1.5
1,311,321 - -0.8
1,311,329 - 0.2
1,311,338 + 0.2
1,311,342 + 0.5
1,311,343 - -1.2
1,311,469 - 16259 mRNA_7891 0.10 -1.1
1,311,650 - 16259 mRNA_7891 0.53 0.8
1,311,777 - 16259 mRNA_7891 0.83 1.2
1,312,175 + -0.1
1,312,176 + -0.3