Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7869

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7868: 16236 - Hypothetical Protein, at 1262755 to 1264857 16236 mRNA_7869: 16237 - KOG4366 Predicted thioesterase, at 1265046 to 1266017 16237 mRNA_7870: 16238 - HMMPfam-Putative S-adenosyl-L-methionine-dependent methyltransferase-PF02636,SUPERFAMILY--SSF53335, at 1266402 to 1268243 16238

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,264,266 - 16236 mRNA_7868 0.72 -0.7
1,264,304 - 16236 mRNA_7868 0.74 0.8
1,264,423 + 16236 mRNA_7868 0.79 1.5
1,264,427 - 16236 mRNA_7868 0.80 -0.7
1,265,135 + 0.2
1,265,183 + 16237 mRNA_7869 0.14 0.8
1,265,187 + 16237 mRNA_7869 0.15 -1.6
1,265,894 + 16237 mRNA_7869 0.87 -0.0
1,266,006 - 0.9
1,266,016 - -0.2
1,266,040 - 0.3
1,266,051 + 0.3
1,266,143 + 0.1
1,266,151 - 0.8
1,266,154 - 0.6
1,266,165 - 1.9
1,266,172 + 1.9
1,266,282 + 0.2
1,266,302 + 0.2
1,266,307 + -0.1
1,266,311 - 1.5
1,266,318 - 2.2
1,266,318 + -0.3
1,266,319 - -0.1
1,266,330 + 0.4
1,266,331 - 0.9
1,266,361 - 0.1
1,266,380 - 0.4