Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7789

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7788: 16156 - Hypothetical Protein, at 1069801 to 1071312 16156 mRNA_7789: 16157 - Hypothetical Protein, at 1071827 to 1073399 16157 mRNA_7790: 16158 - Hypothetical Protein, at 1073885 to 1074580 16158

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,070,862 - 16156 mRNA_7788 0.70 1.7
1,070,989 - 16156 mRNA_7788 0.79 -1.6
1,071,053 + 16156 mRNA_7788 0.83 0.3
1,071,163 - 1.4
1,071,313 - -0.2
1,071,327 + -0.5
1,071,328 - 0.2
1,071,332 + -0.7
1,071,338 + 0.1
1,071,461 - 0.2
1,071,483 + -1.3
1,071,599 - -0.9
1,071,620 - 1.1
1,071,624 - 2.6
1,071,732 - 1.7
1,071,746 + 0.0
1,071,764 - -0.5
1,071,789 - 0.4
1,071,803 - 0.2
1,071,807 - -0.4
1,071,858 + 0.1
1,071,874 - 1.3
1,071,912 - -0.9
1,071,920 - 1.2
1,072,183 + 16157 mRNA_7789 0.23 1.2
1,072,259 - 16157 mRNA_7789 0.27 0.3
1,072,495 - 16157 mRNA_7789 0.42 0.1
1,072,543 - 16157 mRNA_7789 0.46 2.7
1,072,649 + 16157 mRNA_7789 0.52 3.7
1,072,789 + 16157 mRNA_7789 0.61 -0.2
1,073,046 - 16157 mRNA_7789 0.77 1.8
1,073,128 - 16157 mRNA_7789 0.83 -0.2
1,073,221 - 16157 mRNA_7789 0.89 0.6
1,073,227 + 16157 mRNA_7789 0.89 -0.6
1,073,530 + -0.2
1,073,572 - -0.3
1,073,688 - -1.0
1,073,714 - 2.4
1,074,025 - 16158 mRNA_7790 0.20 -3.3
1,074,125 + 16158 mRNA_7790 0.34 -0.1