Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7780

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7779: 16147 - K06655 PHO85 negative regulator of the PHO system, at 1043917 to 1045287 16147 mRNA_7780: 16148 - KOG0376 Serine-threonine phosphatase 2A, catalytic subunit, at 1045975 to 1050892 16148 mRNA_7781: 16149 - K18664 SLH1 antiviral helicase SLH1, at 1050929 to 1056955 16149

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
1,045,249 - -0.2
1,045,454 + 1.0
1,045,464 + -0.2
1,045,469 + 0.6
1,045,475 + 0.3
1,045,619 - 0.1
1,045,626 - 0.2
1,045,630 - 2.0
1,045,637 + -0.0
1,045,787 + 0.3
1,046,021 + 2.1
1,046,078 - -0.7
1,046,170 + -0.1
1,046,204 - 1.0
1,046,507 + 16148 mRNA_7780 0.11 -1.4
1,046,527 + 16148 mRNA_7780 0.11 0.1
1,046,533 - 16148 mRNA_7780 0.11 0.9
1,046,560 + 16148 mRNA_7780 0.12 0.1
1,046,617 - 16148 mRNA_7780 0.13 -0.3
1,046,763 - 16148 mRNA_7780 0.16 0.6
1,046,794 - 16148 mRNA_7780 0.17 0.2
1,046,800 + 16148 mRNA_7780 0.17 1.5
1,046,989 + 16148 mRNA_7780 0.21 -0.0
1,046,992 - 16148 mRNA_7780 0.21 -0.5
1,047,082 + 16148 mRNA_7780 0.23 -0.1
1,047,113 - 16148 mRNA_7780 0.23 0.2
1,047,244 - 16148 mRNA_7780 0.26 0.3
1,047,514 - 16148 mRNA_7780 0.31 0.4
1,047,702 + 16148 mRNA_7780 0.35 -0.1
1,047,807 + 16148 mRNA_7780 0.37 0.9
1,047,959 - 16148 mRNA_7780 0.40 0.5
1,048,101 - 16148 mRNA_7780 0.43 -0.5
1,048,102 + 16148 mRNA_7780 0.43 0.6
1,048,251 + 16148 mRNA_7780 0.46 -1.3
1,048,518 - 16148 mRNA_7780 0.52 -0.9
1,048,524 - 16148 mRNA_7780 0.52 0.9
1,048,536 - 16148 mRNA_7780 0.52 -0.9
1,048,703 - 16148 mRNA_7780 0.55 -1.7
1,048,712 - 16148 mRNA_7780 0.56 -0.4
1,048,727 + 16148 mRNA_7780 0.56 0.7
1,048,741 + 16148 mRNA_7780 0.56 -0.6
1,048,889 + 16148 mRNA_7780 0.59 0.3
1,048,906 - 16148 mRNA_7780 0.60 1.2
1,049,055 - 16148 mRNA_7780 0.63 -1.4
1,049,106 - 16148 mRNA_7780 0.64 -0.3
1,049,136 + 16148 mRNA_7780 0.64 -0.2
1,049,178 + 16148 mRNA_7780 0.65 0.4
1,049,182 + 16148 mRNA_7780 0.65 -0.4
1,049,203 + 16148 mRNA_7780 0.66 -1.2
1,049,313 - 16148 mRNA_7780 0.68 -1.6
1,049,315 + 16148 mRNA_7780 0.68 0.1
1,049,327 + 16148 mRNA_7780 0.68 -0.2
1,049,335 - 16148 mRNA_7780 0.68 0.4
1,049,338 - 16148 mRNA_7780 0.68 1.7
1,049,454 - 16148 mRNA_7780 0.71 1.9
1,049,545 - 16148 mRNA_7780 0.73 -1.3
1,049,866 - 16148 mRNA_7780 0.79 0.9
1,050,055 - 16148 mRNA_7780 0.83 -1.9
1,050,111 - 16148 mRNA_7780 0.84 0.5
1,050,220 + 16148 mRNA_7780 0.86 -0.1
1,050,549 + 1.2
1,050,689 + -2.9
1,050,908 - 0.2
1,050,943 - 1.4
1,051,013 - 1.6
1,051,022 + -0.7
1,051,085 + -1.3
1,051,197 - 1.7
1,051,302 + -0.6
1,051,304 - 1.1
1,051,304 - 2.2
1,051,315 + 1.1
1,051,504 - 0.3
1,051,537 + 16149 mRNA_7781 0.10 0.8
1,051,656 + 16149 mRNA_7781 0.12 -0.9
1,051,769 + 16149 mRNA_7781 0.14 0.5
1,051,770 - 16149 mRNA_7781 0.14 1.2
1,051,783 + 16149 mRNA_7781 0.14 -0.1
1,051,786 - 16149 mRNA_7781 0.14 1.4