Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7774

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7773: 16141 - K12857 SNRNP40, PRP8BP Prp8 binding protein, at 1031798 to 1033403 16141 mRNA_7774: 16142 - KOG1546 Metacaspase involved in regulation of apoptosis, at 1033598 to 1035909 16142 mRNA_7775: 16143 - K01673 cynT, can carbonic anhydrase, at 1036773 to 1037366 16143

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,032,853 + 16141 mRNA_7773 0.66 -0.4
1,033,127 + 16141 mRNA_7773 0.83 -1.2
1,033,257 + 1.7
1,033,394 - -1.2
1,033,543 + -0.4
1,033,560 + -0.7
1,033,702 - -0.8
1,033,711 + 0.2
1,033,714 - -0.7
1,033,984 - 16142 mRNA_7774 0.17 0.7
1,033,997 + 16142 mRNA_7774 0.17 -0.2
1,034,430 - 16142 mRNA_7774 0.36 0.4
1,034,431 - 16142 mRNA_7774 0.36 -0.4
1,034,461 + 16142 mRNA_7774 0.37 0.7
1,034,613 + 16142 mRNA_7774 0.44 -0.7
1,034,842 - 16142 mRNA_7774 0.54 1.1
1,035,318 + 16142 mRNA_7774 0.74 -0.3
1,035,496 + 16142 mRNA_7774 0.82 2.0
1,035,595 + 16142 mRNA_7774 0.86 -0.4
1,035,625 + 16142 mRNA_7774 0.88 0.7
1,036,197 + 1.0
1,036,213 - 1.3
1,036,214 - -1.5
1,036,215 - 2.1
1,036,217 - 1.8
1,036,233 + 0.1
1,036,243 - -1.5
1,036,245 + -0.5
1,036,349 - 0.6