Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7771

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7770: 16138 - K09250 CNBP cellular nucleic acid-binding protein, at 1026696 to 1027876 16138 mRNA_7771: 16139 - HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892, at 1028711 to 1030372 16139 mRNA_7772: 16140 - Hypothetical Protein, at 1030603 to 1031384 16140

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,027,942 + 0.3
1,027,944 - -0.5
1,027,985 + -0.5
1,028,093 - 0.1
1,028,113 + -1.2
1,028,113 - 2.0
1,028,266 + -0.4
1,028,518 - -0.9
1,028,525 + -0.8
1,028,535 - -0.8
1,028,536 + 0.5
1,028,536 + 1.0
1,028,548 - -0.8
1,028,548 - -1.6
1,028,550 - 1.4
1,028,551 - 0.4
1,028,552 + 2.6
1,028,560 + -0.4
1,028,571 + -0.3
1,028,573 + -0.0
1,028,600 + -1.2
1,028,684 - 0.8
1,028,693 - -0.4
1,028,856 - 0.5
1,028,929 - 16139 mRNA_7771 0.13 -1.3
1,029,033 - 16139 mRNA_7771 0.19 -0.0
1,029,132 + 16139 mRNA_7771 0.25 1.0
1,029,291 - 16139 mRNA_7771 0.35 -0.1
1,029,432 + 16139 mRNA_7771 0.43 -1.5
1,029,635 - 16139 mRNA_7771 0.56 -0.2
1,030,174 - 16139 mRNA_7771 0.88 0.9
1,030,183 + 16139 mRNA_7771 0.89 -0.6
1,030,609 - -0.5
1,030,913 - 16140 mRNA_7772 0.40 0.6