Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7737

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7736: 16104 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 956261 to 958930 16104 mRNA_7737: 16105 - HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909, at 959514 to 960315 16105 mRNA_7738: 16106 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 960464 to 961733 16106

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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958,988 - -0.7
958,996 + 1.8
958,996 + 0.4
958,996 + 1.1
959,012 + 3.1
959,013 - 1.4
959,017 + -0.1
959,139 - -0.4
959,147 - -0.9
959,155 + -0.8
959,164 + 0.0
959,189 + 1.1
959,221 + 0.4
959,233 + 0.2
959,298 - 0.2
959,334 - 0.9
959,354 - -1.5
959,355 - 0.8
959,357 + 0.2
959,391 - 0.6
959,396 - -0.5
959,438 + -0.7
959,443 - 0.2
959,454 + 1.1
959,472 - 0.6
959,646 - 16105 mRNA_7737 0.16 0.4
959,726 - 16105 mRNA_7737 0.26 0.8
959,874 + 16105 mRNA_7737 0.45 -0.7
961,150 + 16106 mRNA_7738 0.54 -0.7
961,157 - 16106 mRNA_7738 0.55 -1.2
961,215 + 16106 mRNA_7738 0.59 -0.4