Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7711

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7710: 16078 - K06067 HDAC1_2 histone deacetylase 1/2, at 904428 to 906811 16078 mRNA_7711: 16079 - Hypothetical Protein, at 906900 to 908235 16079 mRNA_7712: 16080 - K12586 RRP43, EXOSC8, OIP2 exosome complex component RRP43, at 908335 to 909649 16080

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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906,811 - 1.1
906,849 - 0.3
906,964 + 1.4
907,009 - 0.1
907,134 + 16079 mRNA_7711 0.18 0.6
907,406 - 16079 mRNA_7711 0.38 1.6
907,691 + 16079 mRNA_7711 0.59 1.0
907,962 - 16079 mRNA_7711 0.79 -0.1
907,967 + 16079 mRNA_7711 0.80 -0.3
907,972 + 16079 mRNA_7711 0.80 1.4
907,978 + 16079 mRNA_7711 0.81 -0.7
908,099 - 16079 mRNA_7711 0.90 1.0