Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7708

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7707: 16075 - HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098, at 895894 to 899712 16075 mRNA_7708: 16076 - Hypothetical Protein, at 900056 to 901517 16076 mRNA_7709: 16077 - K19877 CHS5 chitin biosynthesis protein CHS5, at 902207 to 904253 16077

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
899,295 - 16075 mRNA_7707 0.89 -1.9
899,357 - -0.5
899,381 + -0.5
899,460 - -2.4
899,612 - -0.2
899,804 + 0.2
899,867 + 1.5
899,889 - -0.0
900,081 - -0.4
900,103 + 0.8
900,929 + 16076 mRNA_7708 0.60 0.2
901,046 + 16076 mRNA_7708 0.68 -0.5
901,126 + 16076 mRNA_7708 0.73 1.0
901,471 + 0.0
901,486 + 0.0
901,504 + 2.8
901,505 + 0.1
901,509 + 2.3
901,509 + 0.2
901,522 - 0.3
901,524 + 0.2
901,544 - 0.9
901,547 + 0.2
901,607 + 1.0
901,617 - 0.7
901,635 - 0.6
901,668 - -1.4
901,669 - 0.4
901,677 - 2.7
901,680 - 0.9
901,683 + 0.5
901,694 + 1.5
901,695 - -0.6
901,695 + 0.5
901,696 - -0.2
901,697 - 0.3
901,699 - 0.4
901,705 - 0.1
901,735 - -0.4
901,736 + 0.4
901,737 - -0.1
901,738 + 0.3
901,738 + 0.6
901,738 + 1.1
901,739 + -0.2
901,743 - 0.9
901,749 - 0.3
901,750 - -1.3
901,757 + -0.1
901,776 - 0.0
901,778 + 2.0
901,781 - 0.7
901,782 + 0.2
901,787 - 0.3
901,787 + 1.4
901,800 + 0.1
901,802 - 0.7
901,803 + -2.3
901,813 + 1.1
901,815 + -0.1
901,820 - 0.6
901,828 - -0.0
901,854 - -1.1
901,860 - -1.4
901,862 - 0.1
901,866 - -0.1
901,888 + 0.3
901,925 - -0.1
901,946 - 0.8
901,959 - 1.0
901,962 + 0.9
901,962 - 1.8
901,964 + -0.1
901,965 - 0.5
901,971 + 1.5
901,977 + 1.5
901,991 + 0.1
901,992 - 1.1
902,011 + -0.1
902,100 - 0.2
902,102 - -0.5
902,104 + 0.2
902,156 + 0.3
902,254 - 0.1
902,398 + -0.4