Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7697

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858944 to 862198 16064 mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864285 to 865332 16066

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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861,541 + 16064 mRNA_7696 0.80 0.4
861,592 - 16064 mRNA_7696 0.81 -0.8
862,328 - 1.0
862,369 + -0.2
862,372 - -0.3
862,393 - 2.0
862,603 + -0.3
862,674 - 16065 mRNA_7697 0.15 -0.7
862,835 - 16065 mRNA_7697 0.26 0.1
862,855 + 16065 mRNA_7697 0.28 0.9
862,856 - 16065 mRNA_7697 0.28 2.0
862,857 + 16065 mRNA_7697 0.28 0.7
863,128 + 16065 mRNA_7697 0.47 0.2
863,235 - 16065 mRNA_7697 0.55 -2.1
863,282 - 16065 mRNA_7697 0.58 0.1
863,402 - 16065 mRNA_7697 0.66 -0.5
863,578 - 16065 mRNA_7697 0.79 1.6
863,581 + 16065 mRNA_7697 0.79 0.9
863,588 + 16065 mRNA_7697 0.80 1.5
863,664 - 16065 mRNA_7697 0.85 -0.3
863,677 + 16065 mRNA_7697 0.86 -0.1
863,709 - 16065 mRNA_7697 0.88 -0.7
863,710 + 16065 mRNA_7697 0.88 0.3
863,734 + 16065 mRNA_7697 0.90 0.1
863,974 + 0.9
863,980 + 1.5
863,984 + 2.2
863,996 - 1.7
864,000 + 1.2
864,004 - 0.7
864,017 + 0.7
864,020 - 0.4
864,027 - 1.2
864,033 + 1.8
864,034 - -0.2
864,036 + 1.7
864,060 - 0.3
864,061 + 0.2
864,062 + 1.0
864,076 - -0.0
864,076 - -0.1
864,083 - 0.7
864,086 - -1.0
864,089 + -1.1
864,089 + -0.3
864,118 - 0.4
864,118 - 1.2
864,118 + 0.2
864,235 + 0.3
864,245 + 2.0
864,318 - 0.5
864,361 - 1.0
864,371 - 1.2
864,382 - -0.7
864,794 - 16066 mRNA_7698 0.49 -0.5