Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7695

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7694: 16062 - K12581 CNOT7_8, CAF1, POP2 CCR4-NOT transcription complex subunit 7/8, at 853863 to 855272 16062 mRNA_7695: 16063 - HMMPfam-Domain of unknown function (DUF1992)-PF09350, at 855931 to 857738 16063

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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855,455 - 1.8
855,592 - -1.2
855,621 - 2.3
855,624 + 1.0
855,627 + -0.4
855,629 + -0.2
855,629 - -1.7
855,632 + -1.0
855,740 - -0.3
855,769 + 0.9
855,775 + -0.6
856,266 + 16063 mRNA_7695 0.19 0.3
856,406 + 16063 mRNA_7695 0.26 0.1
856,515 + 16063 mRNA_7695 0.32 -1.9
856,784 + 16063 mRNA_7695 0.47 0.1
856,787 + 16063 mRNA_7695 0.47 0.5
857,191 + 16063 mRNA_7695 0.70 0.1
857,221 - 16063 mRNA_7695 0.71 0.2
857,793 + 1.6
857,931 + -0.5
857,943 - -0.2
857,961 - 0.5
857,963 - -1.6
858,060 - -0.8
858,071 - -3.7
858,073 + -0.9
858,074 - 1.0
858,082 - -0.4
858,529 + 0.5
858,667 - 1.2