Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7687

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7686: 16054 - K06185 ABCF2 ATP-binding cassette, subfamily F, member 2, at 836407 to 838350 16054 mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838504 to 840672 16055 mRNA_7688: 16056 - Hypothetical Protein, at 840776 to 844586 16056

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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838,272 + -0.3
838,484 + -2.0
838,565 - -0.6
838,622 + 2.2
838,724 - 16055 mRNA_7687 0.10 0.5
839,003 - 16055 mRNA_7687 0.23 -0.1
839,004 - 16055 mRNA_7687 0.23 -2.2
839,046 + 16055 mRNA_7687 0.25 1.2
839,148 + 16055 mRNA_7687 0.30 0.2
839,162 - 16055 mRNA_7687 0.30 -0.7
839,291 + 16055 mRNA_7687 0.36 0.3
839,407 - 16055 mRNA_7687 0.42 -1.5
839,563 + 16055 mRNA_7687 0.49 0.8
839,564 - 16055 mRNA_7687 0.49 -0.4
839,632 + 16055 mRNA_7687 0.52 3.3
839,635 - 16055 mRNA_7687 0.52 -1.4
839,726 + 16055 mRNA_7687 0.56 1.7
839,769 - 16055 mRNA_7687 0.58 0.8
839,770 - 16055 mRNA_7687 0.58 -1.0
839,776 - 16055 mRNA_7687 0.59 2.0
839,893 - 16055 mRNA_7687 0.64 1.3
839,893 - 16055 mRNA_7687 0.64 0.1
839,901 + 16055 mRNA_7687 0.64 0.7
839,966 - 16055 mRNA_7687 0.67 -0.0
839,988 + 16055 mRNA_7687 0.68 0.6
840,006 - 16055 mRNA_7687 0.69 1.2
840,297 - 16055 mRNA_7687 0.83 -1.9
840,337 + 16055 mRNA_7687 0.85 -0.5
840,619 - -0.6
840,623 - -0.4
840,623 - 0.4
840,624 + 0.8
840,626 - 0.8
840,627 + 1.0
840,774 + -0.7
840,781 + 0.6
840,883 - 0.9
840,920 + -0.9
841,048 - 0.1
841,217 - 16056 mRNA_7688 0.12 0.3
841,329 - 16056 mRNA_7688 0.15 2.1
841,364 - 16056 mRNA_7688 0.15 1.2
841,503 - 16056 mRNA_7688 0.19 0.2
841,542 - 16056 mRNA_7688 0.20 -1.1
841,604 + 16056 mRNA_7688 0.22 2.3
841,651 + 16056 mRNA_7688 0.23 -0.1
841,661 - 16056 mRNA_7688 0.23 1.1