Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7643

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7642: 16010 - K06943 NOG1 nucleolar GTP-binding protein, at 748051 to 750365 16010 mRNA_7643: 16011 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 750793 to 753754 16011 mRNA_7644: 16012 - KOG0118 FOG RRM domain, at 754118 to 756054 16012

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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750,413 + -1.2
750,420 + 1.7
750,761 - -0.6
750,763 + 0.2
750,886 + 2.0
751,326 + 16011 mRNA_7643 0.18 -0.4
751,626 + 16011 mRNA_7643 0.28 -0.4
751,626 - 16011 mRNA_7643 0.28 -0.2
751,901 + 16011 mRNA_7643 0.37 0.9
752,312 - 16011 mRNA_7643 0.51 -0.1
752,536 - 16011 mRNA_7643 0.59 0.9
752,667 - 16011 mRNA_7643 0.63 1.0
752,799 + 16011 mRNA_7643 0.68 0.7
752,916 - 16011 mRNA_7643 0.72 2.3
753,383 - 16011 mRNA_7643 0.87 -2.0
753,547 + -0.1
753,555 + -0.0
753,830 - -0.1
753,858 + -0.6
753,866 + -0.2
753,901 - -0.2
754,152 - -0.8