Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7588

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7587: 15955 - HMMPfam-Protein of unknown function (DUF2413)-PF10310, at 621699 to 623748 15955 mRNA_7588: 15956 - Hypothetical Protein, at 623955 to 629387 15956 mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629580 to 630504 15957

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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622,995 - 15955 mRNA_7587 0.63 0.0
623,063 + 15955 mRNA_7587 0.67 -1.0
623,379 + 15955 mRNA_7587 0.82 -0.6
623,576 + -0.5
623,878 - 0.5
623,894 + -0.3
624,632 - 15956 mRNA_7588 0.12 -3.5
627,593 + 15956 mRNA_7588 0.67 -0.8
627,603 + 15956 mRNA_7588 0.67 0.1
628,019 - 15956 mRNA_7588 0.75 -0.1
628,322 + 15956 mRNA_7588 0.80 1.1
628,663 - 15956 mRNA_7588 0.87 1.8
629,203 - 0.5
629,210 - -0.0
629,211 + 1.9
629,339 + 0.1
629,361 + -0.1
629,636 - 0.8
629,776 - 15957 mRNA_7589 0.21 -1.2
629,776 + 15957 mRNA_7589 0.21 1.1
629,783 - 15957 mRNA_7589 0.22 1.2
629,791 + 15957 mRNA_7589 0.23 0.9
629,798 + 15957 mRNA_7589 0.24 2.4
629,800 + 15957 mRNA_7589 0.24 -1.0
629,919 - 15957 mRNA_7589 0.37 0.2
630,363 - 15957 mRNA_7589 0.85 2.3