Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7586

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7585: 15953 - K03650 mnmE, trmE, MSS1 tRNA modification GTPase, at 619020 to 621044 15953 mRNA_7586: 15954 - HMMPfam-Cytochrome oxidase c assembly-PF14880, at 621173 to 621587 15954 mRNA_7587: 15955 - HMMPfam-Protein of unknown function (DUF2413)-PF10310, at 621699 to 623748 15955

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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620,297 - 15953 mRNA_7585 0.63 -0.4
620,437 - 15953 mRNA_7585 0.70 0.9
620,496 - 15953 mRNA_7585 0.73 1.0
620,731 - 15953 mRNA_7585 0.84 0.1
620,911 - 0.8
620,932 - 0.5
620,933 - -0.4
620,992 + -0.5
621,040 + 0.5
621,331 + 15954 mRNA_7586 0.38 0.5
621,350 - 15954 mRNA_7586 0.43 0.6
621,517 + 15954 mRNA_7586 0.83 0.6
621,596 - 1.7
621,600 - 0.9
621,605 + 1.6
621,639 - -1.4
621,640 + 0.8
621,772 - 0.5
621,774 + -0.1
621,788 - -0.8
621,789 + 0.9
621,796 - 0.7
621,960 + 15955 mRNA_7587 0.13 1.3
622,089 + 15955 mRNA_7587 0.19 0.3
622,097 + 15955 mRNA_7587 0.19 -0.8
622,097 + 15955 mRNA_7587 0.19 -0.3