Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7583

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616198 to 617544 15951 mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617839 to 618826 15952

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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615,295 + 15950 mRNA_7582 0.33 0.6
615,725 + 15950 mRNA_7582 0.67 -0.4
615,748 + 15950 mRNA_7582 0.69 0.7
615,758 - 15950 mRNA_7582 0.70 0.5
615,765 + 15950 mRNA_7582 0.70 -0.4
615,768 - 15950 mRNA_7582 0.71 -0.5
615,775 + 15950 mRNA_7582 0.71 0.8
616,046 - 1.8
616,199 + -0.9
617,080 + 15951 mRNA_7583 0.65 0.4
617,214 + 15951 mRNA_7583 0.75 3.9
617,251 - 15951 mRNA_7583 0.78 1.3
617,349 + 15951 mRNA_7583 0.85 1.0
617,364 - 15951 mRNA_7583 0.87 1.3
617,484 + 0.4
617,622 + 0.4
617,633 - 0.4
617,686 + -0.2
617,794 + 2.5
617,833 + 0.1
618,089 - 15952 mRNA_7584 0.25 -0.7
618,239 - 15952 mRNA_7584 0.40 -1.1