Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7557

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554930 to 556179 15924 mRNA_7557: 15925 - Hypothetical Protein, at 556281 to 558919 15925

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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555,421 + 15924 mRNA_7556 0.39 1.0
555,695 - 15924 mRNA_7556 0.61 -0.1
556,003 + 15924 mRNA_7556 0.86 0.6
556,285 + -0.3
556,291 - 0.7
556,299 + -0.9
556,435 - -0.1
556,481 + -0.3
557,157 + 15925 mRNA_7557 0.33 0.5
557,900 + 15925 mRNA_7557 0.61 0.9
557,915 + 15925 mRNA_7557 0.62 0.6
558,752 - 0.5
559,030 - 2.0
559,220 - 1.4
559,223 - -0.0
559,224 + 1.0
559,225 - 0.1
559,228 - 1.1
559,230 - 1.4
559,231 + -0.8
559,233 - 0.4
559,233 - 1.7
559,235 + -0.3
559,246 - -0.2
559,246 - 0.2
559,253 - -0.9
559,257 - -0.7
559,260 - 1.0
559,265 - 0.3
559,265 + 0.8
559,317 - 1.5
559,318 + 1.1
559,330 - -0.2
559,330 - 0.5
559,337 + 1.6
559,348 - -1.2
559,388 - -0.3
559,396 + -0.0
559,398 + -0.2
559,398 + -0.5
559,446 - -2.6
559,448 + 0.3
559,449 - -0.4
559,450 - 0.4
559,450 - 1.9
559,454 - -0.1
559,468 - -0.0
559,477 + -0.7
559,477 - 0.4
559,482 - 0.2
559,627 + -0.1
559,629 - -0.6
559,633 + -0.6
559,663 - -1.1
559,769 - -1.0