Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7536

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512882 to 513517 15903 mRNA_7536: 15904 - KOG2216 Conserved coiled/coiled coil protein, at 513749 to 514681 15904 mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514808 to 517082 15905

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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513,583 - 1.8
513,597 + 0.2
513,599 - -0.7
513,728 + 0.2
513,869 - 15904 mRNA_7536 0.13 -0.1
513,873 + 15904 mRNA_7536 0.13 -1.0
513,887 - 15904 mRNA_7536 0.15 0.7
514,016 + 15904 mRNA_7536 0.29 -0.8
514,688 + -1.5
514,730 + 0.3
514,746 + -0.5
514,763 - -1.2
515,048 + 15905 mRNA_7537 0.11 0.3
515,193 + 15905 mRNA_7537 0.17 2.1
515,203 + 15905 mRNA_7537 0.17 -0.4
515,207 - 15905 mRNA_7537 0.18 -0.5
515,213 - 15905 mRNA_7537 0.18 -0.2
515,215 + 15905 mRNA_7537 0.18 1.7
515,259 + 15905 mRNA_7537 0.20 -0.9