Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7467

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7466: 15834 - K17887 SNX25, MDM1 sorting nexin-25, at 345181 to 349645 15834 mRNA_7467: 15835 - Hypothetical Protein, at 349793 to 351109 15835 mRNA_7468: 15836 - Hypothetical Protein, at 351460 to 352308 15836

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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349,006 + 15834 mRNA_7466 0.86 -0.6
349,279 + -0.8
349,279 + 1.4
349,293 + 0.5
349,391 + 1.6
349,409 + 0.3
349,439 - 0.8
349,449 + 1.9
349,569 - -2.2
349,571 - 3.1
349,579 - -0.1
349,579 - -0.0
349,582 - 1.0
349,725 + 3.1
349,744 + -1.0
349,749 + -1.0
349,904 - 0.5
350,015 - 15835 mRNA_7467 0.17 -0.1
350,022 - 15835 mRNA_7467 0.17 -0.4
350,027 + 15835 mRNA_7467 0.18 -0.2
350,136 + 15835 mRNA_7467 0.26 -0.2
350,315 - 15835 mRNA_7467 0.40 0.5
350,320 + 15835 mRNA_7467 0.40 0.1
350,324 - 15835 mRNA_7467 0.40 -0.3
350,337 - 15835 mRNA_7467 0.41 -0.0
350,486 - 15835 mRNA_7467 0.53 -0.9
350,587 - 15835 mRNA_7467 0.60 2.5
350,617 + 15835 mRNA_7467 0.63 -0.7
350,778 - 15835 mRNA_7467 0.75 0.4
351,054 + 0.4
351,104 + 0.1
351,199 - 1.5
351,211 + 0.7
351,327 - 1.3
351,476 - 0.5
351,488 + -0.6
351,630 - 15836 mRNA_7468 0.20 -0.8
351,736 + 15836 mRNA_7468 0.33 0.3
351,781 - 15836 mRNA_7468 0.38 2.3
351,797 - 15836 mRNA_7468 0.40 1.3
351,913 + 15836 mRNA_7468 0.53 -1.4
352,028 - 15836 mRNA_7468 0.67 0.5