Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7464

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7463: 15831 - Hypothetical Protein, at 337178 to 338673 15831 mRNA_7464: 15832 - BLAST expressed protein [Schizophyllum commune H4-8], at 339268 to 340751 15832 mRNA_7465: 15833 - K08518 STXBP5, SRO7_77 syntaxin-binding protein 5, at 340933 to 344642 15833

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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338,305 + 15831 mRNA_7463 0.75 0.1
338,470 + 15831 mRNA_7463 0.86 -0.6
338,738 + 1.3
338,859 + 0.3
338,873 + 0.3
338,925 + -0.4
339,035 - -0.4
339,038 - 0.2
339,174 + 0.4
339,180 - -0.9
339,200 - -0.1
339,331 - 0.4
339,338 + -0.3
339,367 - -0.6
339,482 - 15832 mRNA_7464 0.14 0.8
339,527 + 15832 mRNA_7464 0.17 -1.4
339,529 + 15832 mRNA_7464 0.18 -0.6
339,673 - 15832 mRNA_7464 0.27 -0.7
339,792 + 15832 mRNA_7464 0.35 -0.1
339,801 + 15832 mRNA_7464 0.36 -0.1
340,802 - 1.1
340,816 - 0.1
340,832 - 1.1
340,838 - 0.5
340,839 + 0.5
340,848 + 1.2
340,850 + -0.5
340,850 + 0.9
340,859 + 2.4
340,980 - -0.0
340,988 + 2.4
340,994 + 1.0
341,006 + -1.0
341,266 - 0.1
341,285 - 1.2
341,299 + -0.5
341,433 - 15833 mRNA_7465 0.13 -0.4
341,473 - 15833 mRNA_7465 0.15 -1.0
341,581 + 15833 mRNA_7465 0.17 0.9
341,749 + 15833 mRNA_7465 0.22 -0.8