Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7434

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7433: 15801 - K10356 MYO1 myosin I, at 265180 to 270208 15801 mRNA_7434: 15802 - HMMPfam-Outer membrane protein TOM13-PF08219, at 270590 to 273357 15802 mRNA_7435: 15803 - K09539 DNAJC19 DnaJ homolog subfamily C member 19, at 274120 to 274486 15803

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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269,654 + 15801 mRNA_7433 0.89 2.2
270,258 - 1.6
270,288 - 0.4
270,333 - 0.0
270,446 - -0.3
270,449 - 0.9
270,454 - 0.4
270,555 + -0.2
270,602 + 0.8
270,746 + 1.6
271,824 + 15802 mRNA_7434 0.45 0.5
272,709 + 15802 mRNA_7434 0.77 0.1
273,432 - -1.0
273,434 + -0.4
273,436 - 0.8
273,438 + 0.8
273,438 - 0.9
273,450 - 0.3
273,458 - -1.4
273,458 - -0.6
273,459 - 1.3
273,463 + -0.9
273,489 + 1.2
273,590 - -0.8
273,595 + -0.2
273,714 - -1.0