Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7427

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794 mRNA_7427: 15795 - SUPERFAMILY--SSF51197, at 248497 to 250090 15795

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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247,539 - 15794 mRNA_7426 0.81 -1.4
247,622 + 15794 mRNA_7426 0.90 0.2
247,624 - 15794 mRNA_7426 0.90 -0.1
247,635 - -1.0
247,635 - -0.2
247,638 - 1.5
247,649 - -0.9
247,653 + 0.4
247,714 - 0.7
247,724 - -0.5
247,727 - -0.6
247,738 - -0.5
247,739 - 1.6
247,749 + -0.0
247,750 - 1.4
247,750 + 0.4
247,753 + 1.5
247,756 + 0.6
247,757 + 0.4
247,762 - -0.1
247,766 - 0.3
247,767 + -2.0
247,781 + 0.4
247,792 - 0.2
247,793 + 0.2
247,794 + -0.5
247,796 + -0.3
247,799 - -0.2
247,800 + -0.3
247,826 - 0.6
247,833 + 0.0
247,846 + 0.3
247,860 + -1.1
247,865 + -0.9
247,866 - -0.5
247,871 + 1.9
247,884 + -0.3
247,885 - -2.0
247,887 + -1.5
247,888 - 0.1
247,889 - 0.2
247,892 + 2.4
247,892 - -0.3
247,895 + 0.3
247,898 - -2.0
247,919 + -0.5
247,925 + -0.4
247,925 + 1.4
247,927 + 0.1
247,935 + 0.7
247,935 - -0.7
247,935 + -0.1
247,936 - 0.7
247,936 - -0.3
247,965 + -0.2
247,982 - 0.4
247,995 + 0.9
247,996 - 2.2
248,053 - -0.7
248,055 + -0.1
248,059 - 0.8
248,065 - 0.6
248,067 + -0.7
248,072 + 1.8
248,081 - -0.1
248,082 - -1.5
248,083 - 2.3
248,086 + -0.6
248,087 - -0.2
248,128 + 0.3
248,151 - -0.5
248,173 - -0.1
248,187 - 0.9
248,193 - -0.3
248,198 + -0.1
248,210 + 0.7
248,221 - 0.8
248,232 + -0.3
248,346 + -1.1
248,393 - 1.6
248,798 + 15795 mRNA_7427 0.19 -1.2
249,262 + 15795 mRNA_7427 0.48 0.2
249,387 + 15795 mRNA_7427 0.56 0.3
249,388 + 15795 mRNA_7427 0.56 -0.4
249,413 - 15795 mRNA_7427 0.57 0.3
249,536 - 15795 mRNA_7427 0.65 1.2
249,708 + 15795 mRNA_7427 0.76 0.0
249,973 + 0.9
250,117 - 1.4
250,193 + -0.4
250,239 - -0.1
250,361 + 0.9
250,414 + 0.9
250,504 - -0.8
250,528 - 1.4
250,587 + 1.9
250,694 + 1.1
250,710 + 1.9
250,745 - -0.3
250,782 + 0.0
250,806 - 1.4
250,838 + -0.5
250,838 - 0.1
250,854 + 0.9
250,957 - -0.3
250,958 - 0.8
250,963 + 0.6
250,964 + 0.5
250,973 + -0.7
250,983 + 0.4