Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7422

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7421: 15789 - Hypothetical Protein, at 237711 to 239043 15789 mRNA_7422: 15790 - Hypothetical Protein, at 239461 to 241066 15790 mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241820 to 244654 15791

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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238,516 + 15789 mRNA_7421 0.60 0.2
239,685 - 15790 mRNA_7422 0.14 0.7
239,886 - 15790 mRNA_7422 0.26 -1.1
240,368 - 15790 mRNA_7422 0.56 1.2
240,536 - 15790 mRNA_7422 0.67 0.7
240,642 + 15790 mRNA_7422 0.74 -2.3
241,077 - -1.0
241,162 - 0.1
241,197 + -0.7
241,211 - 0.6
241,365 + 0.6
241,485 - 2.6
241,526 + 0.6
241,581 - 1.1
241,581 - 0.0
241,642 + -0.2
241,648 - 0.5
241,656 - 0.3
241,666 + -0.7
241,669 - 0.2
241,675 + -0.2
241,684 + 1.4
241,687 + -1.0