Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7335

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7334: 15702 - HMMPfam-RTA1 like protein-PF04479, at 29500 to 31086 15702 mRNA_7335: 15703 - Hypothetical Protein, at 31308 to 31781 15703 mRNA_7336: 15704 - Hypothetical Protein, at 31786 to 32791 15704

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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30,341 - 15702 mRNA_7334 0.53 1.0
30,512 - 15702 mRNA_7334 0.64 -0.4
30,819 + 15702 mRNA_7334 0.83 -0.1
30,820 - 15702 mRNA_7334 0.83 -0.9
30,846 + 15702 mRNA_7334 0.85 0.4
30,902 - 15702 mRNA_7334 0.88 1.3
30,920 - 15702 mRNA_7334 0.89 -0.1
30,947 - -1.6
31,065 - -0.6
31,237 + 2.7
31,239 + -0.5
31,259 + -0.3
31,263 + 0.2
31,271 + 0.9
31,285 - 0.2
31,291 - -0.4
31,293 - 0.9
31,299 - 2.9
31,301 - 0.9
31,303 - 0.9
31,315 - 1.3
31,326 - -0.5
31,330 - 1.1
31,340 + -1.5
31,341 - 0.3
31,342 - 1.8
31,372 - 15703 mRNA_7335 0.14 1.4
31,383 + 15703 mRNA_7335 0.16 -0.1
31,385 - 15703 mRNA_7335 0.16 0.7
31,389 - 15703 mRNA_7335 0.17 -1.7
31,397 + 15703 mRNA_7335 0.19 -0.1
31,410 + 15703 mRNA_7335 0.22 1.8
31,434 + 15703 mRNA_7335 0.27 -0.2
31,458 + 15703 mRNA_7335 0.32 1.5
31,532 - 15703 mRNA_7335 0.47 -0.3
32,270 - 15704 mRNA_7336 0.48 -0.2
32,426 - 15704 mRNA_7336 0.64 -1.0
32,589 + 15704 mRNA_7336 0.80 0.4
32,700 + 2.8
32,708 - 1.2
32,748 - -0.2