Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7332

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7331: 15699 - KOG1666 V-SNARE, at 24685 to 25773 15699 mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26472 to 27994 15700 mRNA_7333: 15701 - SUPERFAMILY--SSF52047, at 28402 to 29421 15701

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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25,558 + 15699 mRNA_7331 0.80 -1.7
25,816 - 0.5
25,923 - 0.7
25,931 - -0.1
25,934 + -0.5
26,115 + -2.0
26,257 - -0.0
26,270 - -0.5
26,541 + 1.2
26,542 - -0.3
26,544 - 1.1
26,717 + 15700 mRNA_7332 0.16 0.3
27,044 + 15700 mRNA_7332 0.38 -0.1
27,116 - 15700 mRNA_7332 0.42 1.7
27,291 - 15700 mRNA_7332 0.54 -2.4
27,576 + 15700 mRNA_7332 0.72 0.5
27,627 - 15700 mRNA_7332 0.76 0.3
27,726 - 15700 mRNA_7332 0.82 0.5
27,732 + 15700 mRNA_7332 0.83 1.2
27,878 + 2.4
28,011 + -0.3
28,056 - -0.2
28,056 - 0.3
28,314 - 0.2
28,314 - 1.7
28,315 + 1.5
28,319 + 0.8
28,459 + 1.4
28,468 + 0.7
28,471 + -0.4
28,715 - 15701 mRNA_7333 0.31 1.6
28,900 + 15701 mRNA_7333 0.49 1.6
28,901 - 15701 mRNA_7333 0.49 1.1