Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7331

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7330: 15698 - KOG0409 Predicted dehydrogenase, at 22556 to 24304 15698 mRNA_7331: 15699 - KOG1666 V-SNARE, at 24685 to 25773 15699 mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26472 to 27994 15700

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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23,877 + 15698 mRNA_7330 0.76 -0.6
24,463 + 3.0
24,490 + 0.3
24,493 + 0.1
24,495 + -0.3
24,635 - -0.3
24,672 + 0.7
24,676 + 1.1
24,772 - 1.1
24,939 + 15699 mRNA_7331 0.23 1.7
25,082 + 15699 mRNA_7331 0.36 0.8
25,245 + 15699 mRNA_7331 0.51 0.7
25,558 + 15699 mRNA_7331 0.80 -1.7
25,816 - 0.5
25,923 - 0.7
25,931 - -0.1
25,934 + -0.5
26,115 + -2.0
26,257 - -0.0
26,270 - -0.5
26,541 + 1.2
26,542 - -0.3
26,544 - 1.1
26,717 + 15700 mRNA_7332 0.16 0.3