Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7282

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1288862 to 1290260 15649 mRNA_7282: 15650 - HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1290411 to 1292739 15650 mRNA_7283: 15651 - KOG1535 Predicted fumarylacetoacetate hydralase, at 1293181 to 1295231 15651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,289,423 + 15649 mRNA_7281 0.40 2.7
1,289,434 + 15649 mRNA_7281 0.41 -0.7
1,289,440 - 15649 mRNA_7281 0.41 -0.1
1,289,520 - 15649 mRNA_7281 0.47 0.8
1,289,642 + 15649 mRNA_7281 0.56 0.2
1,289,812 + 15649 mRNA_7281 0.68 -1.2
1,289,964 - 15649 mRNA_7281 0.79 0.1
1,289,995 - 15649 mRNA_7281 0.81 0.0
1,290,195 + -0.9
1,290,443 + -0.0
1,290,533 + 1.0
1,290,561 + 0.2
1,290,577 + 0.2
1,290,872 + 15650 mRNA_7282 0.20 2.4
1,291,320 + 15650 mRNA_7282 0.39 0.0
1,291,323 - 15650 mRNA_7282 0.39 1.0
1,291,385 + 15650 mRNA_7282 0.42 0.5
1,291,385 + 15650 mRNA_7282 0.42 0.7
1,291,511 - 15650 mRNA_7282 0.47 -0.1
1,291,626 + 15650 mRNA_7282 0.52 1.9
1,291,756 - 15650 mRNA_7282 0.58 0.8
1,292,083 + 15650 mRNA_7282 0.72 1.0
1,292,108 + 15650 mRNA_7282 0.73 2.0
1,292,237 - 15650 mRNA_7282 0.78 1.0
1,292,314 - 15650 mRNA_7282 0.82 0.2
1,292,319 + 15650 mRNA_7282 0.82 0.7
1,292,331 - 15650 mRNA_7282 0.82 0.0
1,292,371 + 15650 mRNA_7282 0.84 0.1
1,292,423 + 15650 mRNA_7282 0.86 -0.6
1,292,630 + -0.1
1,292,885 - 0.5
1,292,963 + 0.7
1,292,979 + -0.2
1,293,008 + 0.5
1,293,134 + 0.0
1,293,262 - -1.5
1,293,426 + 15651 mRNA_7283 0.12 0.9
1,293,557 - 15651 mRNA_7283 0.18 1.7
1,293,593 + 15651 mRNA_7283 0.20 -0.0
1,293,663 - 15651 mRNA_7283 0.24 0.6
1,293,725 + 15651 mRNA_7283 0.27 -0.7
1,293,726 - 15651 mRNA_7283 0.27 0.2
1,293,730 + 15651 mRNA_7283 0.27 2.6
1,293,734 - 15651 mRNA_7283 0.27 2.0