Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7270

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7269: 15637 - Hypothetical Protein, at 1264905 to 1266240 15637 mRNA_7270: 15638 - ProSiteProfiles-TEA domain profile.-PS51088, at 1266504 to 1267966 15638 mRNA_7271: 15639 - HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088, at 1268325 to 1269363 15639

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,265,582 - 15637 mRNA_7269 0.51 -0.1
1,265,662 - 15637 mRNA_7269 0.57 0.4
1,265,841 - 15637 mRNA_7269 0.70 0.5
1,265,851 + 15637 mRNA_7269 0.71 -0.2
1,265,951 - 15637 mRNA_7269 0.78 0.8
1,265,951 - 15637 mRNA_7269 0.78 -0.8
1,265,976 - 15637 mRNA_7269 0.80 1.4
1,265,994 - 15637 mRNA_7269 0.82 -0.5
1,266,009 - 15637 mRNA_7269 0.83 -1.5
1,266,020 + 15637 mRNA_7269 0.83 -0.1
1,266,033 - 15637 mRNA_7269 0.84 -0.0
1,266,119 + 0.3
1,266,381 - 1.0
1,266,431 + -0.2
1,266,552 - -0.4
1,266,570 - 0.6
1,266,589 + -0.1
1,266,607 - -0.3
1,266,715 - 15638 mRNA_7270 0.14 -0.4
1,266,723 - 15638 mRNA_7270 0.15 -1.6
1,267,018 + 15638 mRNA_7270 0.35 -1.3
1,267,021 - 15638 mRNA_7270 0.35 1.4
1,267,315 - 15638 mRNA_7270 0.55 0.7
1,267,745 - 15638 mRNA_7270 0.85 -0.9
1,267,758 + 15638 mRNA_7270 0.86 0.2
1,267,767 - 15638 mRNA_7270 0.86 0.2
1,267,860 - 0.5
1,267,879 - 0.4
1,267,890 - -0.5
1,267,906 - 2.0
1,268,038 - -0.5
1,268,039 + 2.8
1,268,181 + 0.7
1,268,181 + 3.7
1,268,181 + 0.4
1,268,201 - -0.2
1,268,231 - 1.4
1,268,348 - 1.8
1,268,351 + 0.0
1,268,355 + 0.9
1,268,365 + 0.7
1,268,369 - -0.1
1,268,462 + 15639 mRNA_7271 0.13 -0.0
1,268,542 + 15639 mRNA_7271 0.21 -1.0
1,268,587 - 15639 mRNA_7271 0.25 0.4
1,268,693 + 15639 mRNA_7271 0.35 1.5
1,268,723 - 15639 mRNA_7271 0.38 -0.1
1,268,769 - 15639 mRNA_7271 0.43 1.1
1,268,771 + 15639 mRNA_7271 0.43 1.8
1,268,893 + 15639 mRNA_7271 0.55 0.3
1,268,895 - 15639 mRNA_7271 0.55 1.7
1,268,896 + 15639 mRNA_7271 0.55 -1.0
1,268,896 + 15639 mRNA_7271 0.55 -0.0
1,268,914 + 15639 mRNA_7271 0.57 2.0
1,268,917 - 15639 mRNA_7271 0.57 -0.8
1,268,921 + 15639 mRNA_7271 0.57 -1.0
1,268,931 + 15639 mRNA_7271 0.58 1.4
1,268,958 - 15639 mRNA_7271 0.61 0.7
1,268,965 + 15639 mRNA_7271 0.62 0.2