Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7126

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7126: 15494 - K15122 SLC41A solute carrier family 41, at 939569 to 941230 15494 mRNA_7127: 15495 - BLAST adenylate cyclase-associated protein [Moesziomyces an..., at 941404 to 943862 15495

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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938,691 - -1.7
938,837 - 0.1
938,848 - -1.6
938,849 + -1.3
938,850 + 0.4
938,960 - 0.7
938,977 - 0.2
938,978 + 1.4
938,986 + 0.3
938,989 + 0.4
938,997 + -1.1
939,000 - -0.1
939,003 + -0.1
939,007 + 1.2
939,008 + -0.0
939,008 + 0.2
939,008 - 2.6
939,009 + -0.8
939,011 + 1.2
939,019 + -0.4
939,297 + 1.4
939,441 + 1.1
939,579 + -0.4
939,866 - 15494 mRNA_7126 0.18 0.8
939,868 - 15494 mRNA_7126 0.18 1.0
940,041 - 15494 mRNA_7126 0.28 -0.8
940,741 - 15494 mRNA_7126 0.71 0.4
940,877 - 15494 mRNA_7126 0.79 -2.5
940,891 - 15494 mRNA_7126 0.80 -0.8
941,014 - 15494 mRNA_7126 0.87 2.6
941,309 - 0.6
941,327 + 0.1
941,328 + -0.5
941,332 - -0.1
941,460 + 1.3
941,460 + 2.8
941,590 + 1.0
941,595 - 0.8
941,602 - -0.8
941,603 + -0.3
941,612 + -0.3
941,729 - 15495 mRNA_7127 0.13 0.6
941,736 + 15495 mRNA_7127 0.14 0.3
941,766 - 15495 mRNA_7127 0.15 2.2
941,772 + 15495 mRNA_7127 0.15 2.8
941,775 + 15495 mRNA_7127 0.15 -0.1
942,035 + 15495 mRNA_7127 0.26 0.7
942,049 - 15495 mRNA_7127 0.26 0.9
942,105 - 15495 mRNA_7127 0.29 -0.3
942,179 - 15495 mRNA_7127 0.32 0.5
942,187 - 15495 mRNA_7127 0.32 0.9