Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7022

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7021: 15389 - K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase, at 692794 to 694459 15389 mRNA_7022: 15390 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 694742 to 696268 15390 mRNA_7023: 15391 - Interpro RNA polymerase I-specific transcription-initiation factor, at 696469 to 700104 15391

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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694,769 + 0.1
694,890 - -0.2
695,063 - 15390 mRNA_7022 0.21 0.1
695,163 + 15390 mRNA_7022 0.28 0.0
695,180 - 15390 mRNA_7022 0.29 1.9
695,194 + 15390 mRNA_7022 0.30 1.2
695,323 + 15390 mRNA_7022 0.38 0.2
695,635 - 15390 mRNA_7022 0.58 -0.4
695,902 - 15390 mRNA_7022 0.76 1.3
695,928 - 15390 mRNA_7022 0.78 2.1
695,929 - 15390 mRNA_7022 0.78 0.5
695,932 + 15390 mRNA_7022 0.78 -0.2
695,937 + 15390 mRNA_7022 0.78 -0.6
695,942 - 15390 mRNA_7022 0.79 -0.3
696,053 - 15390 mRNA_7022 0.86 -0.8
696,076 - 15390 mRNA_7022 0.87 -0.7
696,077 + 15390 mRNA_7022 0.87 0.2
696,080 - 15390 mRNA_7022 0.88 1.8
696,082 + 15390 mRNA_7022 0.88 -0.6
696,082 - 15390 mRNA_7022 0.88 0.3
696,230 + 0.5
696,357 - -0.3
696,359 + 0.5
696,363 - -0.2
696,367 - -0.0
696,387 - 1.1
696,533 - 1.7
696,681 + 1.4