Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7018

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683640 to 684233 15385 mRNA_7018: 15386 - Hypothetical Protein, at 684817 to 685871 15386 mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686088 to 688034 15387

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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683,985 - 15385 mRNA_7017 0.58 1.1
683,996 - 15385 mRNA_7017 0.60 -0.2
684,100 + 15385 mRNA_7017 0.77 -0.1
684,141 - 15385 mRNA_7017 0.84 -1.3
684,293 + -2.2
684,589 - -1.6
684,598 + 0.4
684,598 + 1.3
685,457 + 15386 mRNA_7018 0.61 0.9
685,607 - 15386 mRNA_7018 0.75 0.3
685,742 - 15386 mRNA_7018 0.88 -0.1
685,752 + 15386 mRNA_7018 0.89 -1.0
685,754 + 15386 mRNA_7018 0.89 2.0
685,866 - 1.8
686,054 + 0.1
686,061 + 0.5