Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7005

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7004: 15372 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445, at 650077 to 652863 15372 mRNA_7005: 15373 - SUPERFAMILY--SSF81383, at 653075 to 653981 15373 mRNA_7006: 15374 - K17974 JSN1, PUF1 protein JSN1, at 654250 to 659147 15374

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
652,395 - 15372 mRNA_7004 0.83 1.7
652,562 + 15372 mRNA_7004 0.89 -0.9
652,819 - -1.3
652,835 - -0.8
652,838 - 0.4
652,855 + 0.6
652,992 - -0.5
653,150 + -0.2
653,269 - 15373 mRNA_7005 0.21 1.0
653,270 - 15373 mRNA_7005 0.21 -1.8
653,274 - 15373 mRNA_7005 0.22 0.8
653,278 + 15373 mRNA_7005 0.22 0.1
653,286 + 15373 mRNA_7005 0.23 0.4
653,288 - 15373 mRNA_7005 0.23 -0.5
653,294 + 15373 mRNA_7005 0.24 0.4
653,410 - 15373 mRNA_7005 0.37 -0.1
653,864 - 15373 mRNA_7005 0.87 -0.0
653,977 + -0.2
654,148 - -1.3
654,166 - 0.2
654,255 - -1.0
654,322 + 0.3
654,410 + 0.8
654,598 - 0.2
654,598 + 0.2