Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6997

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6996: 15364 - Hypothetical Protein, at 628009 to 630189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630254 to 632002 15365 mRNA_6998: 15366 - K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase, at 632241 to 635924 15366

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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629,412 - 15364 mRNA_6996 0.64 -0.6
629,710 - 15364 mRNA_6996 0.78 1.4
629,855 - 15364 mRNA_6996 0.85 1.4
629,872 - 15364 mRNA_6996 0.85 0.2
629,885 - 15364 mRNA_6996 0.86 0.8
630,289 + 1.2
630,581 - 15365 mRNA_6997 0.19 -1.5
630,641 + 15365 mRNA_6997 0.22 -1.1
630,709 - 15365 mRNA_6997 0.26 -1.5
631,029 + 15365 mRNA_6997 0.44 -0.5
631,313 - 15365 mRNA_6997 0.61 -0.1
631,347 - 15365 mRNA_6997 0.62 -1.7
631,478 - 15365 mRNA_6997 0.70 -1.7
631,606 + 15365 mRNA_6997 0.77 -0.4
631,628 + 15365 mRNA_6997 0.79 0.7
631,762 - 15365 mRNA_6997 0.86 1.4
631,897 + -0.3
632,045 + -0.0
632,046 - 0.7
632,046 - 0.6
632,057 + 0.2
632,058 + -0.1
632,060 + 0.3
632,073 - 1.5
632,076 + 0.4
632,215 + -0.2
632,218 - 0.7
632,230 - 1.6
632,238 + 0.6
632,365 + 1.7
632,372 + -1.1
632,378 + -0.3
632,381 - -1.4
632,389 + 0.4