Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6980

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6979: 15347 - KOG2789 Putative Zn-finger protein, at 586264 to 588274 15347 mRNA_6980: 15348 - SUPERFAMILY--SSF51445, at 588631 to 590610 15348 mRNA_6981: 15349 - KOG0613 Projectin/twitchin and related proteins, at 590905 to 593177 15349

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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587,725 + 15347 mRNA_6979 0.73 0.9
587,815 + 15347 mRNA_6979 0.77 -0.4
587,979 + 15347 mRNA_6979 0.85 2.8
587,984 - 15347 mRNA_6979 0.86 1.1
588,227 - 1.0
588,266 - 0.4
588,272 + 0.2
588,392 - 1.0
588,569 + 0.3
588,581 - -0.1
588,585 + 0.4
588,586 - -0.6
588,694 - -0.7
588,730 - 0.1
588,752 - 0.1
589,042 + 15348 mRNA_6980 0.21 1.1
589,193 - 15348 mRNA_6980 0.28 -0.4
589,197 + 15348 mRNA_6980 0.29 -0.6
589,254 + 15348 mRNA_6980 0.31 -0.4
589,291 - 15348 mRNA_6980 0.33 1.0
589,317 + 15348 mRNA_6980 0.35 0.3
589,331 - 15348 mRNA_6980 0.35 0.3
589,338 + 15348 mRNA_6980 0.36 1.0
589,577 - 15348 mRNA_6980 0.48 -0.6
589,767 + 15348 mRNA_6980 0.57 0.3
590,182 + 15348 mRNA_6980 0.78 1.0
590,613 + -1.3
590,636 + 0.2
591,064 + -0.2
591,317 - 15349 mRNA_6981 0.18 0.8
591,375 + 15349 mRNA_6981 0.21 0.4
591,480 + 15349 mRNA_6981 0.25 -0.7
591,514 + 15349 mRNA_6981 0.27 1.1