Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6975

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574442 to 577802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578459 to 580488 15343

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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577,638 + 0.3
577,663 - 1.5
577,670 + -0.3
577,803 + 1.9
577,804 - 0.3
577,814 + 0.9
577,933 + 0.2
577,950 - 0.7
577,958 + 2.1
577,962 + -1.3
577,964 + 0.0
577,967 + 0.6
577,977 + -0.3
577,981 - 0.2
577,981 + 1.4
578,087 - 0.5
578,110 + -0.4
578,327 + 1.0
578,418 - -0.0
578,715 + 15343 mRNA_6975 0.13 2.1
579,001 + 15343 mRNA_6975 0.27 1.8
579,150 - 15343 mRNA_6975 0.34 2.5
579,285 + 15343 mRNA_6975 0.41 1.8
579,565 - 15343 mRNA_6975 0.54 1.8
579,586 - 15343 mRNA_6975 0.56 1.2
579,587 - 15343 mRNA_6975 0.56 1.0
579,737 - 15343 mRNA_6975 0.63 1.0
580,034 - 15343 mRNA_6975 0.78 1.9
580,045 - 15343 mRNA_6975 0.78 3.2
580,184 + 15343 mRNA_6975 0.85 1.3
580,331 - 2.7
580,333 + 0.9
580,342 + 1.5
580,350 + 0.5
580,350 + 2.0
580,364 - 1.0
580,378 + 0.4
580,490 - 1.0
580,497 + -0.1
580,539 + 1.2
580,641 - -0.1
580,644 + 0.1
580,645 - 0.6
580,647 + 0.2
580,651 + -0.2
580,653 + -0.3
580,664 + 0.2
580,677 - 0.7
580,789 - 0.8
580,790 + -0.1
580,798 - 2.5
580,799 + 1.6
580,799 - 0.4
580,801 + 0.4
580,804 - 1.6
580,808 + 0.4
580,810 - 0.4
580,816 - 0.0
580,816 - 0.8
580,817 - 0.5
580,819 + 1.8
580,823 + 1.9
580,824 + -0.6
580,825 - 0.3
580,828 + -0.2
580,828 + 1.0
580,829 - 2.3
580,829 + -1.9
580,831 + 1.7
580,834 - -0.8
580,835 - -0.5
580,843 - 0.8
580,849 + 1.6
580,849 + 3.4
580,849 + 0.0
580,849 + 1.2
580,851 + 0.5
580,884 + 1.4
580,902 - 0.6
580,909 + 2.5
580,913 - 0.2
580,917 + -0.7
580,920 - -0.1
580,924 + 1.0
580,925 + 0.3
580,928 + 0.5
580,931 + 1.0
580,938 + -0.5
580,939 + -0.1
580,944 + 0.7
580,944 - 0.2
580,952 + -0.4
580,952 - 0.4
580,959 + -0.8
580,987 - -0.5
581,029 + 0.1
581,087 + 0.7
581,089 - -1.0
581,090 - 0.6
581,091 + -0.2
581,096 - 0.5
581,097 + -0.1
581,113 + 0.4
581,129 - -0.2
581,137 + -1.0
581,144 + 0.2
581,224 - 3.4
581,227 - 0.9
581,235 + -3.4
581,243 - 2.1
581,246 - 1.5
581,258 + 2.0
581,262 + -0.3
581,268 + -0.7
581,400 + 0.1
581,412 - 0.7
581,412 - 0.6
581,423 + 0.8
581,475 + -0.6
581,478 + 0.3
581,488 + -0.1