Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6963

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6962: 15330 - K03132 TAF7 transcription initiation factor TFIID subunit 7, at 547886 to 549459 15330 mRNA_6963: 15331 - Hypothetical Protein, at 549842 to 550144 15331 mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551090 to 553316 15332

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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549,542 + -1.0
549,551 - 1.5
549,555 + -1.1
549,719 + -0.2
549,727 + 0.7
549,885 + 15331 mRNA_6963 0.14 2.0
550,010 - 15331 mRNA_6963 0.55 0.9
550,010 + 15331 mRNA_6963 0.55 -0.1
550,286 + 0.4
550,419 - 0.0
550,443 - -2.2
550,448 - -0.7
550,479 + 0.2
550,489 + 1.9
550,492 + -1.7
550,531 + -0.0
550,536 + -1.0
550,554 - 1.4
550,644 - 0.3
550,649 - 0.5
550,654 - -0.3
550,657 + 0.4
550,721 + 0.4
550,760 - -1.2
550,934 + -0.5