Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6936

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469424 to 473834 15303 mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473933 to 475521 15304 mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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473,930 + 1.5
474,091 - 1.6
474,230 - 15304 mRNA_6936 0.19 -0.6
474,715 + 15304 mRNA_6936 0.49 -0.8
474,731 + 15304 mRNA_6936 0.50 -0.3
474,850 + 15304 mRNA_6936 0.58 -0.7
475,134 - 15304 mRNA_6936 0.76 2.6
475,259 - 15304 mRNA_6936 0.83 -0.2
475,532 - 1.0
475,533 + -1.2
475,556 - -0.9
475,587 - -0.4
475,736 + 0.1
475,862 + -0.1
475,869 + 0.8
476,163 + -0.9
476,289 + 0.2