Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6915

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6914: 15282 - KOG0254 Predicted transporter (major facilitator superfamily), at 421351 to 423576 15282 mRNA_6915: 15283 - K01130 E3.1.6.1, aslA arylsulfatase, at 424136 to 426200 15283 mRNA_6916: 15284 - SUPERFAMILY--SSF52833, at 426501 to 427574 15284

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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423,149 - 15282 mRNA_6914 0.81 0.0
423,282 + 15282 mRNA_6914 0.87 -0.6
423,434 - 0.4
423,466 + 2.2
423,708 + 1.8
423,715 + 1.1
423,731 - 0.5
423,734 - 0.0
423,894 - 1.5
423,918 - 0.1
423,936 - -0.4
423,949 + -0.3
423,953 + -1.2
423,954 + 0.1
423,955 + -0.4
423,965 - 2.0
423,966 + 1.7
423,977 - -0.0
423,980 + 1.5
423,991 + 0.2
424,001 + 1.1
424,005 + 1.0
424,017 + 0.8
424,045 + 0.4
424,136 + 1.2
424,145 - -0.0
424,242 + -0.3
424,344 - 15283 mRNA_6915 0.10 0.2
424,349 + 15283 mRNA_6915 0.10 -1.7
424,746 + 15283 mRNA_6915 0.30 0.5
424,746 + 15283 mRNA_6915 0.30 0.2
425,115 - 15283 mRNA_6915 0.47 1.5
425,435 - 15283 mRNA_6915 0.63 0.7
425,750 - 15283 mRNA_6915 0.78 1.9
425,803 + 15283 mRNA_6915 0.81 1.0
426,132 - 0.2
426,379 - 0.5
426,424 - 0.1
426,602 + -0.0
426,764 - 15284 mRNA_6916 0.24 -0.2
426,841 - 15284 mRNA_6916 0.32 0.2
427,018 + 15284 mRNA_6916 0.48 0.4