Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6879

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339326 to 341674 15247 mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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338,375 - 2.4
338,453 - 0.5
338,617 - 1.7
338,641 - 0.2
338,654 - 0.9
338,971 - -0.2
339,224 + 0.4
339,566 + 15247 mRNA_6879 0.10 2.4
339,674 + 15247 mRNA_6879 0.15 1.9
339,816 - 15247 mRNA_6879 0.21 1.0
340,179 - 15247 mRNA_6879 0.36 -1.1
340,301 - 15247 mRNA_6879 0.42 0.9
340,412 - 15247 mRNA_6879 0.46 1.5
340,830 - 15247 mRNA_6879 0.64 -0.2
341,164 - 15247 mRNA_6879 0.78 1.1
341,289 + 15247 mRNA_6879 0.84 -0.6
341,413 - 15247 mRNA_6879 0.89 2.4
341,444 + 1.9
341,596 + 0.5
341,607 - -1.1
341,730 - -0.1
341,741 + 1.8
341,752 - 0.1
341,756 + -0.5
341,904 + -0.6
342,053 + 1.5
342,058 + 1.5
342,188 - 1.0
342,188 - -1.3
342,195 + 0.9
342,198 - 0.6
342,211 + 1.5
342,233 + 1.2
342,347 + -0.9
342,347 + 1.5
342,357 - -0.5
342,361 - -0.8
342,371 + 0.8
342,508 - 1.3
342,533 + 0.9
342,636 - -3.4
342,660 + -0.3